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CRISPR

File:4QYZ.png · Wikimedia Commons · See Wikimedia Commons

EntityQ412563· pop 44· linked from 611 articles

Also known as clustered regularly interspaced short palindromic repeats

thumb|262px|Diagram of the CRISPR prokaryotic antiviral defense mechanism CRISPR (; acronym for clustered regularly interspaced short palindromic repeats) is a family of DNA sequences found in the genomes of prokaryotic organisms such as bacteria and archaea. Each sequence within an individual prokaryotic CRISPR is derived from a DNA fragment of a bacteriophage that had previously infected the prokaryote or one of its ancestors. These sequences are used to detect and destroy DNA from similar bacteriophages during subsequent infections. Hence these sequences play a key role in the antiviral (i.

Key facts

Nonhuman protein.Name
Cascade (CRISPR-associated complex for antiviral defense)
Nonhuman protein.image
4QYZ.png
Nonhuman protein.caption
CRISPR Cascade protein (cyan) bound to CRISPR RNA (green) and phage DNA (red)
Nonhuman protein.Organism
Escherichia coli
Nonhuman protein.TaxID
511145
Nonhuman protein.Symbol
CRISPR
Nonhuman protein.EntrezGene
947229
Nonhuman protein.PDB
4QYZ
Nonhuman protein.UniProt
P38036
Nonhuman protein.RefSeqProtein
NP_417241.1
Protein family.Symbol
CRISPR_assoc
Protein family.Name
CRISPR associated protein CasC/Cse3/Cas6 (Type I effector RNase)
Protein family.image
PDB 1wj9 EBI.jpg
Protein family.caption
Crystal structure of a crispr-associated protein from Thermus thermophilus
Protein family.Pfam
PF08798
Protein family.InterPro
IPR010179
Protein family.CDD
cd09727
Protein family.Pfam_clan
CL0362

via Wikipedia infobox

Research

67,864 papers

via PubMed

Wikidata facts

Image
CAS 4qyz.png
Show 2 more facts
Commons category
CRISPR
time of discovery or invention
1987-00-00
Sources (2)

via Wikidata · CC0

~37 min read

Article

29 sections
Contents
  • History
  • Repeated sequences
  • CRISPR-associated systems
  • Cas9
  • Cas12a
  • Cas13
  • Locus structure
  • Repeats and spacers
  • CRISPR RNA structures
  • Cas genes and CRISPR subtypes
  • Mechanism
  • Spacer acquisition
  • Protospacer adjacent motifs (PAM)
  • Insertion variants
  • Biogenesis
  • Interference
  • Evolution
  • Coevolution
  • Rates
  • Identification
  • Use by phages
  • Applications
  • Experiences with CRISPR
  • See also
  • Notes
  • References
  • Further reading
  • External links
  • Protein Data Bank

thumb|262px|Diagram of the CRISPR prokaryotic antiviral defense mechanism CRISPR (; acronym for clustered regularly interspaced short palindromic repeats) is a family of DNA sequences found in the genomes of prokaryotic organisms such as bacteria and archaea. Each sequence within an individual prokaryotic CRISPR is derived from a DNA fragment of a bacteriophage that had previously infected the prokaryote or one of its ancestors. These sequences are used to detect and destroy DNA from similar bacteriophages during subsequent infections. Hence these sequences play a key role in the antiviral (i.e. anti-phage) defense system of prokaryotes and provide a form of heritable, acquired immunity. CRISPR is found in approximately 50% of sequenced bacterial genomes and nearly 90% of sequenced archaea.

Cas9 (or "CRISPR-associated protein 9") is an enzyme that uses CRISPR sequences as a guide to recognize and open up specific strands of DNA that are complementary to the CRISPR sequence. Cas9 enzymes together with CRISPR sequences form the basis of a technology known as CRISPR-Cas9 that can be used to edit genes within living organisms. This editing process has a wide variety of applications including basic biological research, development of biotechnological products, and treatment of diseases. The development of the CRISPR-Cas9 genome editing technique was recognized by the Nobel Prize in Chemistry in 2020 awarded to Emmanuelle Charpentier and Jennifer Doudna.

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