DUX4
Sign in to saveAlso known as DUX4L, double homeobox 4
Double homeobox, 4 also known as DUX4 is a protein which in humans is encoded by the DUX4 gene. Its misexpression is the cause of facioscapulohumeral muscular dystrophy (FSHD).
Gene data
DUX4- Name
- double homeobox 4
- Type
- protein-coding
- Position
- 190,173,774–190,185,942 (+)
- Aliases
- DUX4L
- Ensembl
- ENSG00000260596
- RefSeq RNA
- NM_001205218.1, NM_001278056.1, NM_001293798.3, NM_001306068.3, NM_001363820.2
- RefSeq protein
- NP_001280727.1, NP_001292997.1, NP_001350749.1
This gene is located within a D4Z4 repeat array in the subtelomeric region of chromosome 4q. The D4Z4 repeat is polymorphic in length; a similar D4Z4 repeat array has been identified on chromosome 10. Each D4Z4 repeat unit has an open reading frame (named DUX4) that encodes two homeoboxes; the repeat-array and ORF is conserved in other mammals. The encoded protein has been reported to function as a transcriptional activator of paired-like homeodomain transcription factor 1 (PITX1; GeneID 5307). Contraction of the macrosatellite repeat causes autosomal dominant facioscapulohumeral muscular dystrophy (FSHD). Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2015].
Gene Ontology
Biological process
Molecular function
Cellular component
Pathways
via MyGene.info
Gene · Ensembl
double homeobox 4
- Symbol
- DUX4
- Biotype
- Protein coding
- Organism
- Homo sapiens
- Location
- 4:190,173,774-190,196,133
- Strand
- Forward (+)
- Assembly
- GRCh38
via Ensembl · EMBL-EBI
Wikidata facts
- Image
- DUX4-FL Protein.png
Show 4 more facts
- exact match
- identifiers.org/ncbigene/100288687
- genomic start
- 190173774
- genomic end
- 190185942
- cytogenetic location
- 4q35.2
Sources (3)
via Wikidata · CC0
~3 min read
Article
6 sectionsContents
- Gene
- Structure
- Function
- Clinical significance
- See also
- References
Double homeobox, 4 also known as DUX4 is a protein which in humans is encoded by the DUX4 gene. Its misexpression is the cause of facioscapulohumeral muscular dystrophy (FSHD).
==Gene== thumb|right|alt=D4Z4 array diagram|400px|D4Z4 array with three D4Z4 repeats and the 4qA allele {| style="width: 100%; |- | CEN || centromeric end || TEL || [[telomeric end |- | NDE box || non-deleted element || PAS || polyadenylation site |- | triangle || D4Z4 repeat|| trapezoid || partial D4Z4 repeat |- | white box || pLAM || gray boxes || DUX4 exons 1, 2, 3 |- | colspan="4" style="text-align: center; background: #cccdcf;" | arrows |- | corner || promoters || straight || RNA transcripts |- | black || sense || red || antisense |- | blue || DBE-T || dashes || dicing sites |} ]] This gene is located within a D4Z4 macrosatellite repeat array in the subtelomeric region of chromosome 4q35. The D4Z4 repeat array contains 11-150 D4Z4 repeats in the general population; a highly homologous D4Z4 repeat array has been identified on chromosome 10. The gene consists of three exons. Exons 1 and 2 are present in each D4Z4 repeat. Only one copy of exon 3 is present, telomeric to the D4Z4 repeat array. The open reading frame (ORF) is entirely contained within exon 1 and contains two homeoboxes. Exons 2 and 3 encode for the three prime untranslated region (3′-UTR). In certain haplotypes, exon 3 contains a polyadenylation signal. There was no evidence for transcription from the standard cDNA libraries however RT-PCR and in-vitro expression experiments indicate that the ORF is transcribed.