PCDHB16
Sign in to saveAlso known as ME1, PCDH-BETA16, PCDH3X, PCDHB8a, protocadherin beta 16
Protocadherin beta-16 is a protein that in humans is encoded by the PCDHB16 gene.
In the Vinony graph
Vinony's link graph records 2 inbound references to PCDHB16, and connects out to PubMed, human chromosome 5 and Ensembl genome database project.
It is catalogued under the topic Genes on human chromosome 5.
Vinony links it to 5 Wikipedia language editions.
Gene data
PCDHB16- Name
- protocadherin beta 16
- Type
- protein-coding
- Position
- 141,182,387–141,186,226 (+)
- Aliases
- ME1, PCDH-BETA16, PCDH3X, PCDHB8a
- Ensembl
- ENSG00000291684
- RefSeq RNA
- NM_020957.4
- RefSeq protein
- NP_066008.2
This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The beta cluster contains 16 genes and 3 pseudogenes, each encoding 6 extracellular cadherin domains and a cytoplasmic tail that deviates from others in the cadherin superfamily. The extracellular domains interact in a homophilic manner to specify differential cell-cell connections. Unlike the alpha and gamma clusters, the transcripts from these genes are made up of only one large exon, not sharing common 3' exons as expected. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins. Their specific functions are unknown but they most likely play a critical role in the establishment and function of specific cell-cell neural connections. [provided by RefSeq, Jul 2008].
Gene Ontology
Biological process
Molecular function
Cellular component
via MyGene.info
Gene · Ensembl
protocadherin beta 16
- Symbol
- PCDHB16
- Biotype
- Protein coding
- Organism
- Homo sapiens
- Location
- 5:141,182,387-141,186,226
- Strand
- Forward (+)
- Assembly
- GRCh38
via Ensembl · EMBL-EBI
Wikidata facts
- Instance of
- gene
Show 8 more facts
- HomoloGene ID
- 81881
- genomic start
- 141182387
- found in taxon
- Homo sapiens
- exact match
- identifiers.org/ncbigene/57717
- chromosome
- human chromosome 5
- genomic end
- 141186226
- cytogenetic location
- 5q31.3
- expressed in
- islet of Langerhans
Sources (4)
via Wikidata · CC0
~1 min read
Encyclopedic overview
2 sectionsContents
- References
- Further reading
Protocadherin beta-16 is a protein that in humans is encoded by the PCDHB16 gene.
This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The beta cluster contains 16 genes and 3 pseudogenes, each encoding 6 extracellular cadherin domains and a cytoplasmic tail that deviates from others in the cadherin superfamily. The extracellular domains interact in a homophilic manner to specify differential cell-cell connections. Unlike the alpha and gamma clusters, the transcripts from these genes are made up of only one large exon, not sharing common 3' exons as expected. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins. Their specific functions are unknown but they most likely play a critical role in the establishment and function of specific cell-cell neural connections.
Excerpted from Wikipedia’s “PCDHB16” article, available under the CC BY-SA 4.0 licence.