c-di-GMP

Also known as cyclic diguanylate monophosphate, 3',5'-Cyclic diguanylic acid, cdiGMP, Bis-(3',5')-cyclic diGMP, Cyclic di-3',5'-guanylate, cyclic diguanylate, cyclic-di-GMP

chemical compound

In the Vinony graph

Vinony's link graph records 98 inbound references to c-di-GMP, and connects out to deoxyribonucleotide, extracellular polymeric substance and Komagataeibacter xylinus.

It is catalogued under topics including Chembox image size set, Cyclic nucleotides and Nucleotides.

Vinony links it to 10 Wikipedia language editions.

Chemical data

Formula: C20H24N10O14P2
Molecular weight: 690.4 g/mol
IUPAC name: 2-amino-9-[(1S,6R,8R,9R,10S,15R,17R,18R)-17-(2-amino-6-oxo-3H-purin-9-yl)-3,9,12,18-tetrahydroxy-3,12-dioxo-2,4,7,11,13,16-hexaoxa-3lambda5,12lambda5-diphosphatricyclo[13.3.0.06,10]octadecan-8-yl]-3H-purin-6-one
SMILES: C1[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=NC4=C3NC(=NC4=O)N)O)OP(=O)(OC[C@@H]5[C@H]([C@H]([C@@H](O5)N6C=NC7=C6NC(=NC7=O)N)O)OP(=O)(O1)O)O
InChIKey: PKFDLKSEZWEFGL-MHARETSRSA-N
XLogP: -6.8
Polar surface area: 341 Å²
H-bond donors: 8
H-bond acceptors: 16
Formal charge: 0

via PubChem

Drug data · ChEMBL

Molecule type: Small molecule

via ChEMBL · EBI

Wikidata facts

Subclass of: cyclic nucleotide
Mass: 690.095

Show 4 more facts

chemical formula: C₂₀H₂₄N₁₀O₁₄P₂
isomeric SMILES: C1[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=NC4=C3NC(=NC4=O)N)O)OP(=O)(OC[C@@H]5[C@H]([C@H]([C@@H](O5)N6C=NC7=C6NC(=NC7=O)N)O)OP(=O)(O1)O)O
canonical SMILES: C1C2C(C(C(O2)N3C=NC4=C3NC(=NC4=O)N)O)OP(=O)(OCC5C(C(C(O5)N6C=NC7=C6NC(=NC7=O)N)O)OP(=O)(O1)O)O
Commons category: Cyclic di-GMP

Sources (2)

via Wikidata · CC0